Publications

Full Papers

2008

Berczi, A. (2008) Újabb vérpiros fehérjék: a citokróm b561 fehérjecsalád. Élet és Tudomány LXIII, 1062-1065.
Berczi, A. and Asard, H. (2008) Expression and purification of the recombinant mouse tumor suppressor cytochrome b561 protein. Acta Biol. Szeged. 52, 257-265.
Dixon, N., Pali, T., Kee, T.P., Ball, S., Harrison, M.A., Findlay, J.B.C., Nyman, J., Vaananen, K., Finbow, M.E. and Marsh, D. (2008) Interaction of spin-labelled inhibitors of the vacuolar H+-ATPase with the transmembrane Vo-sector. Biophysical Journal 94(2), 506-514.
Fodor, E., Fedosova, N., Ferencz, C., Marsh, D., Pali, T. and Esmann, M. (2008) Stabilization of Na,K-ATPase by ionic interactions. Biochimica at Biophysica Acta - Biomembranes 1778(4), 835-843.
Kota, Z., Pali, T., Dixon, N., Kee, T.P., Harrison, M.A., Findlay, J.B., Finbow, M.E. and Marsh, D. (2008) Incorporation of Transmembrane Peptides from the Vacuolar H(+)-ATPase in Phospholipid Membranes: Spin-Label Electron Paramagnetic Resonance and Polarized Infrared Spectroscopy. Biochemistry 47(12), 3937-3949.
Krumova, S.B., Koehorst, R.B., Bota, A., Pali, T., van Hoek, A., Garab, G., van Amerongen, H. (2008) Temperature dependence of the lipid packing in thylakoid membranes studied by time- and spectrally resolved fluorescence of Merocyanine 540. Biochimica et Biophysica Acta - Biomembranes 1778, 2823-2833.

2007

Berczi, A., Su, D. and Asard, H. (2007) An Arabidopsis cytochrome b561 with trans-membrane ferrireductase capability. FEBS Letters 581 (7), 1505-1508.
Berczi, A. (2007) Elektronmozgás fehérjékben. Fizikai Szemle LVII(9-10), 320-325.
Der, A., Kelemen, L., Fabián, L., Taneva, S.G., Fodor, E., Pali, T., Cupane, A., Cacace, M.G. and Ramsden, J.J. (2007) Interfacial water structure controls protein conformation. Journal of Physical Chemistry B 111(19), 5344-5350.
Gergely, C., Szalontai, B., Moradian-Oldak, J. and Cuisinier, F.J.G. (2007) Polyelectrolyte-mediated adsorption of amelogenin monomers and nanospheres forming mono- or multilayers. Biomacromolecules 8(7), 2228-2236.
Pali, T. and Marsh, D. (2007) Obituary - László I. Horváth (1949-2006) Chemistry and Physics of Lipids 148(2), 61-62.
Pilbat, A.-M., Szegletes, Z., Kota, Z., Ball, V., Schaaf, P., Voegel, J.-C., and Szalontai, B. (2007) Phospholipid bilayers as biomembrane-like barriers in layer-by-layer polyelectrolyte films. Langmuir 23(15), 8236-8242.
Stoitchkova, K., Zsiros, O., Jávorfi, T., Pali, T., Andreeva, A., Gombos, Z. and Garab, G. (2006) Heat- and light-induced reorganizations in the phycobilisome antenna of Synechocystis sp PCC 6803. Thermo-optic effect. Biochimica at Biophysica Acta - Bioenergetics 1767 (6), 750-756.

2006

Berczi, A. (2006) Preface: What has happened before the 8th ICMRS? Acta Biol. Szeged. 50, 43-44.
Berczi, A., Asard, H. (2006) Characterization of an ascorbate-reducible cytochrome b561 by site- directed mutagenesis. Acta Biol. Szeged. 50, 55-59.
Fodor, E. and Ginsburg, A. (2006) Specific DNA binding by the homeodomain Nkx2.5(C56S): detection of impaired DNA or unfolded protein by isothermal titration calorimetry. Proteins 64(1), 13-8.
Lakshminarasimhan, M., Berczi, A., Asard, H. (2006) Substrate-dependent reduction of a recombinant chromaffin granule Cyt- b561 and its R72A mutant. Acta Biol. Szeged. 50, 61-65.
Marsh, D. and Pali, T. (2006) Lipid conformation in crystalline bilayers and in crystals of transmembrane proteins (review paper). Chemistry and Physics of Lipids 141, 48-65.
Pali, T., Bashtovyy, D. and Marsh, D. (2006) Stoichiometry of lipid interactions with transmembrane proteins - deduced from the 3-D structures. Protein Science 15, 1153-1161.
Pali, T., Finbow, M.E. and Marsh, D. (2006) A divalent-ion binding site on the 16-kDa proton channel from Nephrops norvegicus - revealed by EPR spectroscopy. Biochimica et Biophysica Acta 1758, 206-212.
Pilbat, A-M., Ball, V., Schaaf, P., Voegel, J-C. and Szalontai, B. (2006) Partial poly(glutamic acid) T poly(aspartic acid) exchange in layer- by-layer polyelectrolyte films. Structural alterations in the three- component architectures. Langmuir 22, 5753-5759.
Wagner, W., Fodor, E., Ginsburg, A., Hammer, J.A. 3rd. (2006) The binding of DYNLL2 to myosin Va requires alternatively spliced exon B and stabilizes a portion of the myosin's coiled-coil domain. Biochemistry 45(38), 11564-11577.
Zhang, D., Su, D., Bérczi, A., Vargas, A., Asard, H. (2006) An ascorbate-reducible cytochrome b561 is localized in macrophage lysosomes. Biochimica et Biophysica Acta 1760, 1903-1913.

2005

Allakhverdiev, S.I., Tsvetkova, N., Mohanty, P., Szalontai, B., Moon, B.Y., Debreczeny, M. and Murata, N. (2005) Irreversible photoinhibition of photosystem II is caused by exposure of Synechocystis cells to strong light for a prolonged period. Biochimica et Biophysica Acta - Bioenergetics 1708(3), 342-351.
Berczi, A., Su, D., Lakshminarasimhan, M., Vargas, A. and Asard, H. (2005) Heterologous expression and site-directed mutagenesis of an ascorbate-reducible cytochrome b561. Archives of Biochemistry and Biophysics 443 (1-2): 82-92.
Fejer, G., Szalay, K., Gyory, I., Fejes, M., Kusz, E., Nedieanu, S., Pali, T., Schmidt, T., Siklodi, B., Lazar, G., Lazar, G., Duda, E. (2005) Adenovirus infection dramatically augments lipopolysaccharide-induced TNF production and sensitizes to lethal shock. Journal of Immunology 175(3), 1498-1506.
Fodor, E., Mack, J.W., Maeng, J-S., Ju, J-H., Lee, H.S., Gruschus, J.M., Ferretti, J.A. and Ginsburg, A. (2005) Cardiac-Specific Nkx2.5 Homeodomain: Conformational Stability and Specific DNA Binding of Nkx2.5(C56S). Biochemistry 44 (37), 12480-12490.

2004

Gergely, C., Bahi, S., Szalontai, B., Flores, H., Schaaf, S., Voegel, J-C., Cuisinier, F.J.G. (2004) Human serum albumin self-assembly on weak polyelectrolyte multilayer films structurally modified by pH changes. Langmuir 20, 5575-5582
Csanyi, L.J., Jaky, K., Kota, Z. and Pali, T. (2004) Oxidation of hydrocarbons by O2 in the presence of onium salts and onium ion-pair complexes as catalysts. Journal of Molecular Catalysis A - Chemical 209(1-2), 59-68.
Dixon, N., Pali, T., Kee, T.P. and Marsh, D. (2004) Spin-labelled vacuolar-ATPase inhibitors in lipid membranes. Biochimica et Biophyisica Acta - Biomembranes 1665(1-2), 177-183
Griesen, D., Su, D., Berczi, A. and Asard, H. (2004) Localization of an ascorbate-reducible cytochrome b561 in the plant tonoplast. Plant Physiology 134(2), 726-734.
Jessel, N., Schwinte, P., Ball, V., Lavalle, Ph., Boulmedais, F., Donohue, R., Darcy, R., Szalontai, B., Schaaf, P., Voegel, J.-C., and Ogier, J. (2004) Pyridylamino-beta-cyclodextrin as a molecular chaperone for lipopolysaccharide embedded in a multilayered polyelectrolyte architecture. Advanced Functional Materials (14), 963-969
Kelemen, L., Rizk, S., Debreczeny, M., Ogier, J. and Szalontai, B. (2004) Streptococcal antigen I/II binds to extracellular proteins through intermolecular beta-sheets. FEBS Letters 566, 190-194.
Kispeter, J., Fekete, M., Feher, L., Fodor, E., Kovacs, L., Laszlo, Zs. and Pali, T. (2004) Quality changes in dry onion products during conservation: a comparative study. Academic and Applied Research in Military Science (in press)
Kota, Z., Pali, T. and Marsh, D. (2004) Orientation and lipid-peptide interactions of gramicidin A in lipid membranes: polarized ATR infrared spectroscopy and spin-label electron spin resonance. Biophysical Journal 86(3), 1521-1531.
Marsh, D., Horvath, L.I., Pali, T., and Livshits, V. (2004) Chapter 11: Saturation Transfer Spectroscopy of Biological Membranes. In: Biomedical EPR - Part A: Free Radicals, Metals, Medicine and Physiology. Series: Biological Magnetic Resonance, Vol. 23, Set: Biomedical EPR. Eaton, Sandra S.; Eaton, Gareth R.; Berliner, Lawrence J. (Eds.). Plenum US, Springer Biochemistry (ISBN: 0-306-48506-0), The Netherlands, pp. 309-368
Marsh, D. and Pali, T. (2004) The Protein-Lipid Interface: Perspectives from Magnetic Resonance and Crystal Structures (review article) Biochimica et Biophyisica Acta - Biomembranes 1666(1-2), 118-141
Nedeianu, S., Pali, T. and Marsh, D. (2004) Membrane penetration of nitric oxide and its donor S-nitroso-N-acetylpenicillamine: a spin-label electron paramagnetic resonance spectroscopic study. Biochimica et Biophysica Acta - Biomembranes 1661(2), 135-143.
Pali, T., Dixon, N., Kee, T.P., and Marsh, D. (2004) Rapid Report: Incorporation of the V-ATPase inhibitors concanamycin and indole pentadiene in lipid membranes. Spin-label EPR studies. Biochimica et Biophyisica Acta - Biomembranes 1663(1-2), 14-18.
Pali, T., Whyteside, G., Dixon, N., Kee, T.P., Ball, S., Harrison, M.A., Findlay, J.B.C., Finbow, M. and Marsh, D. (2004) Interaction of inhibitors of the vacuolar H+-ATPase with the transmembrane Vo-sector. Biochemistry 43, 12297-12305.

2003

Bashtovyy, D., Berczi, A., Asard, H. and Pali, T. (2003) Structure prediction for the di-heme cytochrome b-561 protein family. Protoplasma 221, 31-40.
Berczi, A. and Asard, H. (2003) Soluble proteins, an often overlooked contaminant in plasma membrane preparations. Trends in Plant Sci. 8, 250-251.
Berczi, A. and Horvath, G. (2003) Lipid rafts in the plant plasma membrane? Acta Biologica Szegediensis 47(1-4), 7-10.
Berczi, A., Caubergs, R.J. and Asard, H. (2003) Partial purification and characterization of an ascorbate-reducible b-type cytochrome from the plasma membrane of Arabidopsis thaliana leaves. Protoplasma 221, 47-56.
Csanyi, L.J., Jaky, K., Dombi, G., Evanics, F., Deno, G. and Kota, Z. (2003) Onium-decavanadate ion-pair complexes as catalysts in the oxidation of hydrocarbons by O-2. Journal of Molecular Catalysis A - Chemical 195 (1-2), 101-111.
Debreczeny, M., Ball, V., Boulmedais, F., Szalontai, B, Voegel, J.C., Schaaf, P. (2003) Multilayers built from two component polyanions and single component polycation solutions: A way to engineer films with desired secondary structure. Journal of Physical Chemistry B 107(46), 12734-12739.
Dixon, N., Pali, T., Ball, S., Harrison, M.A., Marsh, D., Findlay, J.B.C., and Kee, T.P. (2003) New biophysical probes for structure-activity analyses of vacuolar-H+-ATPase enzymes. Organic and Biomolecular Chemistry 1(24), 4361-4363.
Inaba, M., Suzuki, I., Szalontai, B., Kanesaki, Y., Los, D.A., Hayashi, H., Murata, N. (2003) Gene-engineered rigidification of membrane lipids enhances the cold inducibility of gene expression in Synechocystis. Journal of Biological Chemistry 278 (14), 12191-12198
Kispeter, J., Bajusz-Kabok, K., Fekete, M., Szabo, G., Fodor, E. and Pali, T. (2003) Changes induced in spice paprika powder by treatment with ionising radiation and saturated steam. Radiation Physics and Chemistry 68(5), 893-900.
Pali, T., Garab, G., Horvath, L.I. and Kota, Z. (2003) Functional significance of the lipid-protein interface in photosynthetic membranes (review article). Cellular Molecular Life Sciences 60(8), 1591-1606.
Szalontai, B., Kota, Z., Nonaka, H. and Murata, N. (2003) Structural consequences of genetically engineered saturation of the fatty acids of phosphatidylglycerol in tobacco thylakoid membranes. An FTIR study. Biochemistry 42 (14), 4292-4299.

2002

Berczi, A. and Asard, H. (2002) Ascorbate-reducible b-type cytochrome in the plant plasma membrane. Acta Biologica Szegediensis 46, 17-18.
Kota, Z., Horvath, L.I., Droppa, M., Horvath, G., Farkas, T. and Pali, T. (2002) Protein assembly and heat stability in developing thylakoid membranes during greening. Proc. Natl. Acad. Sci. USA 99(19), 12149-12154.
Kota, Z., Szalontai, B., Droppa, M., Horvath, G. and Pali, T. (2002) Formation of inverted hexagonal phase from thylakoid membranes upon heating. Cellular and Molecular Biology Letters 7(1): 126-128.
Nedeianu, S. and Pali, T. (2002) EPR spectroscopy of common nitric oxide - spin trap complexes. Cellular and Molecular Biology Letters 7(1), 142-143.
Pali, T. and Marsh, D. (2002) Structural studies on membrane proteins by non-linear spin label EPR spectroscopy. Cellular and Molecular Biology Letters 7(1), 87-91.
Schwinte, P., Ball, V., Szalontai, B., Haikel, Y., Voegel, J.C. and Schaaf, P. (2002) Secondary structure of proteins adsorbed onto or embedded in polyelectrolyte multilayers. Biomacromolecules 3(6), 1135-1143.
Varkonyi, Zs., Masamoto, K., Debreczeny, M., Zsiros, O., Ughy, B., Gombos, Z., Domonkos, I., Farkas, T., Wada, H. and Szalontai, B. (2002) Low-temperature-induced accumulation of xantophylls and its structural consequences in the photosynthetic membranes of the cyanobacterium Cylindrospermopsis raciborskii. An FTIR spectroscopic syudy. Proc. Natl. Acad. Sci. USA 99(4), 2410-2415.
Zsiros, O., Kis, M., Mustárdy, L., Farkas, T., Varkonyi, Zs., Gombos, Z. and Szalontai, B. (2002) Light-driven structural changes in thylakoid and cytoplasmic membranes of a cyanobacterium, Synechocystis PCC 6803. Journal of Plant Physiology 159(4), 403-414.

2001

Asard, H., Kapila, Y., Verelst, W. and Berczi, A. (2001) The higher plant plasma membrane cytochrome b561. A protein in search of a function. Protoplasma 217 (1-3), 77-93.
Bashtovyy, D., Hemminga, H.M., Marsh, D. and Pali, T. (2001) Constrained modelling of spin-labelled major coat protein mutants from M13 bacteriophage in a phospholipid bilayer. Protein Science 10(5), 979-987.
Berczi, A., Luthje, S. and Asard, H. (2001) b-Type cytochromes in plasma membranes of Phaseolus vulgaris hypocotyls, Arabidopsis thaliana leaves and Zea mays roots. Protoplasma 217(1-3), 50-55.
Farkas, T., Fodor, E. and Kitajka, K. (2001) Response of fish to environmental temperature at the level of membranephospholipids. Aquaculture Research 32(8), 645-657.
Kiricsi, M., Horvath, L.I., Dux, L. and Pali, T. (2001) Spin Label EPR Studies of the Effect of Gramicidin S on Lipid Chain Dynamics. Journal of Molecular Structure 563 (S.I.), 469-475.
Marsh, D. and Pali, T. (2001) Infrared dichroism from the x-ray structure of bacteriorhodopsin. Biophysical Journal 80(1), 305-312.
Pali, T. and Marsh, D. (2001) Tilt, twist and coiling in beta-barrel membrane proteins: Relation to infrared dichroism. Biophysical Journal 80(6), 2789-2797.
Schwinte, P, Voegel, J.C., Picart, C., Haikel, Y., Schaaf, P. and Szalontai, B. (2001) Stabilizing effects of various polyelectrolyte multilayer films on the structure of adsorbed/embedded fibrinogen molecules: An ATR-FTIR study. Journal of Physical Chemistry B 105(47), 11906-11916.
Szilvassy, Z., Csont, T., Pali, T., Droy-Lefaix, M.T. and Ferdinandy, P. (2001) Nitric oxide, peroxynitrite and cGMP in atherosclerosis-induced hypertension in rabbits: Beneficial effects of cicletanine. J. Vasc. Res. 38 (1), 39-46.

2000

Berczi, A. and Moller, I.M. (2000) Redox enzymes in the plant plasma membrane and their possible roles. Plant, Cell and Environment 23(12), 1287-1302.
Farkas, T., Kitajka, K., Fodor, E., Csengeri, I., Lahdes, E., Yeo, Y.K., Krasznai, Z. and Halver, J.E. (2000) Docosahexaenoic acid containing phospholipid molecular species in brainsof vertebrates Proc. Natl. Acad. Sci. U.S.A., 97, pp. 6362-6366.
Kostrzewa, A., Pali, T., Froncisz, W. and Marsh, D. (2000) Membrane location of spin-labeled cytochrome c determined by paramagnetic relaxation agents. Biochemistry 39(20), 6066-6074.
Lahdes, E., Balogh, G., Fodor, E. and Farkas, T. (2000) Adaptation of composition and biophysical properties of phospholipids to temperature by the crustacean, Gammarus spp. Lipids 35(10), 1093-1098.
Logue, J.A., DeVires, A.L., Fodor, E. and Cossins, A.R. (2000) Lipid compositional correlates of temperature-adaptive interspecific differences in membrane physical structure. Journal of Experimental Biology, 203, 2105-2115.
Nagy, L., Yamaguchi, T., Nomura, M., Pali, T. and Ohtaki, H. (2000) Structure of Cu(II) complexes of D-ribose and D-glucosamine. Electronic, ESR and EXAFS studies (Hungarian). Magyar Kemiai Folyoirat 106(4), 139-147.
Pali, T., Kleinschmidt, J.H., Powell, G. and Marsh, D. (2000) Non-linear electron paramagnetic resonance studies of the interaction ofcytochrome c oxidase with spin-labelled lipids in gel-phase membranes. Biochemistry 39(9), 2355-2361.
Szalontai, B., Nishiyama, Y., Gombos, Z. and Murata, N. (2000) Membrane dynamics as seen by Fourier transform infrared spectroscopy in a cyanobacterium, Synechocystis PCC 6803. The effect of lipid unsaturation and the protein-to-lipid ratio. Biochim. Biophys. Acta-Biomembr 1509, 409-419.
Torok, B., Torok, M., Rozsa-Tarjani, M., Palinko, I., Horvath, L.I., Kiricsi, I. and Molnar, A. (2000) Interactions between solvent molecules and the reduced or unreduced forms of silico-molybdic acid studied by ESR and NMR spectroscopies and molecular modelling. Inorg. Chim. Acta 298(1), 77-83.
Trost, P, Berczi, A., Sparla, F., Sponza, G., Marzadori, B., Asard, H. and Pupillo, P. (2000) Purification of cytochrome b-561 from bean hypocotyls plasma membrane. Evidence for the presence of two heme centers. Biochim. Biophys. Acta-Biomembr. 1468(1-2), 1-5.

1999

Belagyi, J., Pas, M., Raspor, P., Pesti, M. and Pali, T. (1999) Effect of hexavalent chromium on eukaryotic plasma membrane by EPR spectroscopy. Biochimica et Biophysica Acta 1421, 175-182.
Csonka, C., Szilvassy, Z., Fulop, F., Pali, T., Blasig, I.E., Tosaki, A., Schulz, R. and Ferdinandy, P. (1999) Classic preconditioning decreases the harmful accumulation of nitric oxide during ischemia and reperfusion in rat hearts. Circulation 100(22), 2260-2266.
Csont, T., Szilvassy, Z., Fulop, F., Nedeianu, S., Pali, T., Tosaki, A., Dux and L. and Ferdinandy, P. (1999) Direct myocardial anti-ischaemic effect of GTN in both nitrate-tolerant and nontolerant rats: a cyclic GMP-independent activation of K-ATP. British Journal of Pharmacology. 128(7):1427-1434.
Droppa, M., Kota, Z., Pali, T., Szalontai, B., Horvath. L. I. and Horvath, G. (1999) Structural-functional organization of thylakoids in developing chloroplasts. In: The Chloroplasts: From Molecular Biology to Biotechnology (J.H. Argyroudi-Akoyunoglou and H. Senger, eds.). Kluwer Academic Publishers, The Netherlands, pp. 55-60.
Gedelyi, Sz., Kecskes, A., Fodor, E., Farkas, T. and Nagy, L. (1999) Lipids affect the charge stabilization in wild type and mutant reaction centers of Rhodobacter sphaeroides. In: Photosynthesis: Mechanisms and Effects, Ed. G. Garab, Kluwer Academic Publishers, Dordrecht, Netherland, Vol. II. pp.893-896.
Kota, Z., Debreczeny, M., and Szalontai, B. (1999) Separable contributions of ordered and disordered lipid fatty acyl chain segments to nCH2 bands in model and biological membranes: a Fourier transform infrared spectroscopic study. Biospectroscopy 5(3), 169-178.
Kota, Z., Szalontai, B., Droppa, M., Horvath, G. and Pali, T. (1999) Fourier transform infrared and electron paramagnetic resonance spectroscopic studies of thylakoid membranes. Journal of Molecular Structure 481, 395-400.
Marsh, D., Livshits, V.A., Pali, T. and Gaffney, B.J. (1999) Recent developments in biological spin-label spectroscopy. In: Spectroscopy of Biological Molecules: New Directions (J. Greve, G.J. Puppels and C. Otto, eds.). Kluwer Academic Publishers, Dordrecht/Boston/London. pp. 647-650.
Mihailescu, D. and Horvath, L.I. (1999) Molecular dynamics of lipid association at the hydrophobic interface of gramicidin S. European Biophysical Journal Letters 28(3), 216-221.
Nagy, L., Fodor, E., Tandori, J., Rinyu, L. and Farkas, T. (1999) Lipids affect the charge stabilization in wild type and mutant reaction centers of Rhodobacter sphaeroides. Australian Journal of Plant Physiology 26(5):465-473.
Pali, T., Finbow, E.M. and Marsh, D. (1999) Membrane assembly of the 16-kDa proteolipid channel from Nephrops norvegicus studied by relaxation enhancements in spin-label ESR. Biochemistry 38 (43), 14311-14319.
Swamy, M.J., Horvath, L.I., Brophy, P.J. and Marsh, D. (1999) Interactions between lipid-anchored and transmembrane proteins. Spin-label ESR studies on avidin-biotinyl phosphatidylethanolamine in membrane recombinants with myelin proteolipid proteins. Biochemistry 38(49):16333-16339.
Szakonyi, G., Dux, L. and Horvath, L.I. (1999) Rearrangement of boundary, stand-by, and fluid lipids during the formation of two-dimensional crystals of Ca2+-ATPase. Journal of Molecular Structure 482-483, 253-256.
Szalontai, B., Horvath, L.I., Debreczeny, M., Droppa, M. and Horvath, G. (1999) Molecular rearrangements of thylakoids after heavy metal poisoning as seen by Fourier transform infrared (FTIR) and electron spin resonance (ESR) spectroscopy. Photosynthesis Research 61, 241-252.
Szalontai, B., Nishiyama, Y., Gombos, Z. and Murata, N. (1999) Membrane dynamics studied by FTIR spectroscopy in thylakoid and cytoplasmic membranes of Synechocystis PCC6803. Lipids and the effect of protein to lipid ratios. In: Spectroscopy of Biological Molecules: New Directions (J. Greve, G.J. Puppels and C. Otto, eds.). Kluwer Academic Publishers, Dordrecht/Boston/London. pp. 385-386.